Bioinformatics Algorithms: Design and Implementation in Python

Bioinformatics Algorithms: Design and Implementation in Python 1st Edition
by Miguel Rocha ,Pedro G. Ferreira
Paperback: 400 pages
Publisher: Academic Press; 1 edition (June 26,2018)
Language: English
ISBN-10: 0128125209
ISBN-13: 9780128125205
Book Description
Bioinformatics Algorithms: Design and Implementation in Python provides a comprehensive book on many of the most important bioinformatics problems,putting forward the best algorithms and showing how to implement them. The book focuses on the use of the Python programming language and its algorithms,which is quickly becoming the most popular language in the bioinformatics field. Readers will find the tools they need to improve their knowledge and skills with regard to algorithm development and implementation,and will also uncover prototypes of bioinformatics applications that demonstrate the main principles underlying real world applications.
1 Introduction
2An Introduction to the Python Language
3 Cellular and Molecular Biology Fundamentals
4Basic Processing of Biological Sequences
5 Finding Patterns in Sequences
6Pairwise Sequence Alignment
7 Searching Similar Sequences in Databases
8 Multiple Sequence Alignment
9 Phylogenetic Analysis
10 Motif Discovery Algorithms
11 Probabilistic Motifs and Stochastic Algorithms
12 Hidden Markov Models
13 Graphs: Concepts and Algorithms
14 Graphs and Biological Networks
15Assembling Reads Into Genomes: Graph-Based Algorithms
16Matching Reads to Reference Sequences
17 Further Reading and Resources
Final Words
Bibliography
Index
Back Cover